The Coast Guard JROTC Program is organized into units established at public and private secondary educational institutions. The following schools currently host a CGJROTC unit:
- Kodiak High School – Kodiak, AK
- Saraland High School – Saraland, AL
- Mission Bay High School – San Diego, CA
- Sussex Technical High School – Georgetown, DE
- MAST Academy – Key Biscayne, FL
- Pinellas Park High School – Largo, FL
- Innovation High School – Orlando, FL
- Kalani High School – Honolulu, HI
- Barnstable High School – Hyannis, MA
- Clinton High School – Clinton, MS
- Camden County High School – Camden, NC
- Topsail High School – Hampstead, NC
- Marshfield High School – Coos Bay, OR
- Lucy G. Beckham High School – Mt. Pleasant, SC
- Veterans Memorial High School – Corpus Christi, TX